BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B08SP1|AL426161
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1395 1517 0.0
>3x_Contig1395
Length = 6688
Score = 1517 bits (764), Expect = 0.0
Identities = 766/768 (99%)
Strand = Plus / Plus
Query: 1 gatctcgagctgttcaagaactatagattcaaaactgtggtgagttatgtgttcatcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 gatctcgagctgttcaagaactatagattcaaaactgtggtgagttatgtgttcatcttt 1056
Query: 61 tggggcttaacaattttaaaagtggtactcttcgcatcagacatctatacatgtatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 tggggcttaacaattttaaaagtggtactcttcgcatcagacatctatacatgtatcaag 1116
Query: 121 ctattagctttcaattcttggtccaataatattataaaaccatacctctcgtttaagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 ctattagctttcaattcttggtccaataatattataaaaccatacctctcgtttaagatc 1176
Query: 181 tcgaaatggctgttcagcggttgtattctagcatctatcgctttaatgttatgggaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 tcgaaatggctgttcagcggttgtattctagcatctatcgctttaatgttatgggaagtt 1236
Query: 241 atcaatgggatacgtatctatagaacaagaagtattgcattaacttacgtcaacaatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 atcaatgggatacgtatctatagaacaagaagtattgcattaacttacgtcaacaatttc 1296
Query: 301 tccaggatggtaaattcaatcaccaactataacatattctgcgtatacaataagatcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 tccaggatggtaaattcaatcaccaactataacatattctgcgtatacaataagatcact 1356
Query: 361 ccaaagggacggttccaaaagatatctttttacacattcttcgaatttaaagactgtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 ccaaagggacggttccaaaagatatctttttacacattcttcgaatttaaagactgtgtt 1416
Query: 421 cgacttctatttacggacactccgagacaagtgattaacggattgaccttatggtcagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 cgacttctatttacggacactccgagacaagtgattaacggattgaccttatggtcagtt 1476
Query: 481 ttggtcacaaacaacaatggagcmaacttaggacagttggagaattttgatgggctcatc 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1477 ttggtcacaaacaacaatggagcaaacttaggacagttggagaattttgatgggctcatc 1536
Query: 541 acgaagataaagatcatcgctgatactaatcatcaggaagctgtgctattgtcgtttatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 acgaagataaagatcatcgctgatactaatcatcaggaagctgtgctattgtcgtttatg 1596
Query: 601 cttttatcatttgctatttggactgtgttcatggctaaacttatcgtggcagtcatattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 cttttatcatttgctatttggactgtgttcatggctaaacttatcgtggcagtcatattt 1656
Query: 661 gcaccattcgtataccataccatttattcaaactactctgtacggggtctaaaagagctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 gcaccattcgtataccataccatttattcaaactactctgtacggggtctaaaagagctt 1716
Query: 721 gtttgcacaacagtkaacaagagagtcgacgaattggtggaaaaatat 768
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1717 gtttgcacaacagtgaacaagagagtcgacgaattggtggaaaaatat 1764
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5306
Number of Sequences: 1807
Number of extensions: 5306
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)